3D structure

PDB id
8JSH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 30S-body-IF3 complex from Escherichia coli
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
UAGAAUUC*GAGGAAUACCGGUGG*CGG
Length
26 nucleotides
Bulged bases
8JSH|1|g|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8JSH|1|g|U|672
8JSH|1|g|A|673
8JSH|1|g|G|674
8JSH|1|g|A|675
8JSH|1|g|A|676
8JSH|1|g|U|677
8JSH|1|g|U|678
8JSH|1|g|C|679
*
8JSH|1|g|G|711
8JSH|1|g|A|712
8JSH|1|g|G|713
8JSH|1|g|G|714
8JSH|1|g|A|715
8JSH|1|g|A|716
8JSH|1|g|U|717
8JSH|1|g|A|718
8JSH|1|g|C|719
8JSH|1|g|C|720
8JSH|1|g|G|721
8JSH|1|g|G|722
8JSH|1|g|U|723
8JSH|1|g|G|724
8JSH|1|g|G|725
*
8JSH|1|g|C|732
8JSH|1|g|G|733
8JSH|1|g|G|734

Current chains

Chain g
16S ribosomal RNA

Nearby chains

Chain 1
30S ribosomal protein S18
Chain 2
30S ribosomal protein S21
Chain n
30S ribosomal protein S6, fully modified isoform
Chain q
Small ribosomal subunit protein uS11
Chain u
30S ribosomal protein S15

Coloring options:

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