J3_8K3O_014
3D structure
- PDB id
- 8K3O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- UAGAAUU*AGGAAUACCGGUGG*CGG
- Length
- 24 nucleotides
- Bulged bases
- 8K3O|1|A|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8K3O|1|A|U|672
8K3O|1|A|A|673
8K3O|1|A|G|674
8K3O|1|A|A|675
8K3O|1|A|A|676
8K3O|1|A|U|677
8K3O|1|A|U|678
*
8K3O|1|A|A|712
8K3O|1|A|G|713
8K3O|1|A|G|714
8K3O|1|A|A|715
8K3O|1|A|A|716
8K3O|1|A|U|717
8K3O|1|A|A|718
8K3O|1|A|C|719
8K3O|1|A|C|720
8K3O|1|A|G|721
8K3O|1|A|G|722
8K3O|1|A|U|723
8K3O|1|A|G|724
8K3O|1|A|G|725
*
8K3O|1|A|C|732
8K3O|1|A|G|733
8K3O|1|A|G|734
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- 30S ribosomal protein S6, fully modified isoform
- Chain K
- 30S ribosomal protein S11
- Chain O
- 30S ribosomal protein S15
- Chain R
- 30S ribosomal protein S18
- Chain X
- 30S ribosomal protein S21
Coloring options: