J3_8OIP_006
3D structure
- PDB id
- 8OIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUCAG*CACAAUCA*UAAAAACG
- Length
- 22 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIP|1|AA|C|623
8OIP|1|AA|U|624
8OIP|1|AA|U|625
8OIP|1|AA|C|626
8OIP|1|AA|A|627
8OIP|1|AA|G|628
*
8OIP|1|AA|C|656
8OIP|1|AA|A|657
8OIP|1|AA|C|658
8OIP|1|AA|A|659
8OIP|1|AA|A|660
8OIP|1|AA|U|661
8OIP|1|AA|C|662
8OIP|1|AA|A|663
*
8OIP|1|AA|U|671
8OIP|1|AA|A|672
8OIP|1|AA|A|673
8OIP|1|AA|A|674
8OIP|1|AA|A|675
8OIP|1|AA|A|676
8OIP|1|AA|C|677
8OIP|1|AA|G|678
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AB
- 28S ribosomal protein S35, mitochondrial isoform 1
- Chain AC
- Mitochondrial ribosomal protein S24
- Chain AF
- Mitochondrial ribosomal protein S7
- Chain AH
- Mitochondrial ribosomal protein S10
- Chain AK
- Mitochondrial ribosomal protein S14
- Chain Ad
- 28S ribosomal protein S5, mitochondrial isoform X2
- Chain Ag
- uS9m
Coloring options: