J3_8OIP_014

3D structure

PDB id

8OIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUUU*AUAUCCACCACAC*GGAG

Length

22 nucleotides

Bulged bases

8OIP|1|AA|U|724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIP|1|AA|C|721
8OIP|1|AA|A|722
8OIP|1|AA|U|723
8OIP|1|AA|U|724
8OIP|1|AA|U|725
*
8OIP|1|AA|A|737
8OIP|1|AA|U|738
8OIP|1|AA|A|739
8OIP|1|AA|U|740
8OIP|1|AA|C|741
8OIP|1|AA|C|742
8OIP|1|AA|A|743
8OIP|1|AA|C|744
8OIP|1|AA|C|745
8OIP|1|AA|A|746
8OIP|1|AA|C|747
8OIP|1|AA|A|748
8OIP|1|AA|C|749
*
8OIP|1|AA|G|778
8OIP|1|AA|G|779
8OIP|1|AA|A|780
8OIP|1|AA|G|781

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Mitochondrial ribosomal protein S7

Chain AX

Death associated protein 3