J3_8OIQ_004

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACA*UAAUUAAC*GUU

Length

14 nucleotides

Bulged bases

8OIQ|1|B8|U|705

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIQ|1|B8|A|676
8OIQ|1|B8|C|677
8OIQ|1|B8|A|678
*
8OIQ|1|B8|U|701
8OIQ|1|B8|A|702
8OIQ|1|B8|A|703
8OIQ|1|B8|U|704
8OIQ|1|B8|U|705
8OIQ|1|B8|A|706
8OIQ|1|B8|A|707
8OIQ|1|B8|C|708
*
8OIQ|1|B8|G|753
8OIQ|1|B8|U|754
8OIQ|1|B8|U|755

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BB

39S ribosomal protein L23, mitochondrial

Chain BF

Mitochondrial ribosomal protein L47

Chain Bi

39S ribosomal protein S30, mitochondrial

Chain Bq

Mitochondrial ribosomal protein L41