J3_8OIQ_006
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAG*CUAUAGAGAUAGUAC*GGAAAG
- Length
- 25 nucleotides
- Bulged bases
- 8OIQ|1|B8|U|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B8|C|8
8OIQ|1|B8|U|9
8OIQ|1|B8|A|10
8OIQ|1|B8|G|11
*
8OIQ|1|B8|C|106
8OIQ|1|B8|U|107
8OIQ|1|B8|A|108
8OIQ|1|B8|U|109
8OIQ|1|B8|A|110
8OIQ|1|B8|G|111
8OIQ|1|B8|A|112
8OIQ|1|B8|G|113
8OIQ|1|B8|A|114
8OIQ|1|B8|U|115
8OIQ|1|B8|A|116
8OIQ|1|B8|G|117
8OIQ|1|B8|U|118
8OIQ|1|B8|A|119
8OIQ|1|B8|C|120
*
8OIQ|1|B8|G|127
8OIQ|1|B8|G|128
8OIQ|1|B8|A|129
8OIQ|1|B8|A|130
8OIQ|1|B8|A|131
8OIQ|1|B8|G|132
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BB
- 39S ribosomal protein L23, mitochondrial
- Chain BC
- uL24m
- Chain BF
- Mitochondrial ribosomal protein L47
- Chain BJ
- Mitochondrial ribosomal protein L34
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain Bq
- Mitochondrial ribosomal protein L41
- Chain Bt
- mL44
- Chain Bu
- Mitochondrial ribosomal protein L45
- Chain Bz
- Mitochondrial ribosomal protein L51
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