J3_8OIQ_007
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUAAAAUCUUAAUACUACCAUAG*CAAUUGAG*CAACAAAUUCACCAACAUAAUCCCAAAAACUAAUAACAAAC
- Length
- 72 nucleotides
- Bulged bases
- 8OIQ|1|B8|A|493, 8OIQ|1|B8|C|561, 8OIQ|1|B8|U|566, 8OIQ|1|B8|C|567, 8OIQ|1|B8|A|574, 8OIQ|1|B8|C|575, 8OIQ|1|B8|U|576, 8OIQ|1|B8|A|577, 8OIQ|1|B8|U|579, 8OIQ|1|B8|A|585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B8|G|482
8OIQ|1|B8|U|483
8OIQ|1|B8|A|484
8OIQ|1|B8|A|485
8OIQ|1|B8|A|486
8OIQ|1|B8|A|487
8OIQ|1|B8|U|488
8OIQ|1|B8|C|489
8OIQ|1|B8|U|490
8OIQ|1|B8|U|491
8OIQ|1|B8|A|492
8OIQ|1|B8|A|493
8OIQ|1|B8|U|494
8OIQ|1|B8|A|495
8OIQ|1|B8|C|496
8OIQ|1|B8|U|497
8OIQ|1|B8|A|498
8OIQ|1|B8|C|499
8OIQ|1|B8|C|500
8OIQ|1|B8|A|501
8OIQ|1|B8|U|502
8OIQ|1|B8|A|503
8OIQ|1|B8|G|504
*
8OIQ|1|B8|C|524
8OIQ|1|B8|A|525
8OIQ|1|B8|A|526
8OIQ|1|B8|U|527
8OIQ|1|B8|U|528
8OIQ|1|B8|G|529
8OIQ|1|B8|A|530
8OIQ|1|B8|G|531
*
8OIQ|1|B8|C|546
8OIQ|1|B8|A|547
8OIQ|1|B8|A|548
8OIQ|1|B8|C|549
8OIQ|1|B8|A|550
8OIQ|1|B8|A|551
8OIQ|1|B8|A|552
8OIQ|1|B8|U|553
8OIQ|1|B8|U|554
8OIQ|1|B8|C|555
8OIQ|1|B8|A|556
8OIQ|1|B8|C|557
8OIQ|1|B8|C|558
8OIQ|1|B8|A|559
8OIQ|1|B8|A|560
8OIQ|1|B8|C|561
8OIQ|1|B8|A|562
8OIQ|1|B8|U|563
8OIQ|1|B8|A|564
8OIQ|1|B8|A|565
8OIQ|1|B8|U|566
8OIQ|1|B8|C|567
8OIQ|1|B8|C|568
8OIQ|1|B8|C|569
8OIQ|1|B8|A|570
8OIQ|1|B8|A|571
8OIQ|1|B8|A|572
8OIQ|1|B8|A|573
8OIQ|1|B8|A|574
8OIQ|1|B8|C|575
8OIQ|1|B8|U|576
8OIQ|1|B8|A|577
8OIQ|1|B8|A|578
8OIQ|1|B8|U|579
8OIQ|1|B8|A|580
8OIQ|1|B8|A|581
8OIQ|1|B8|C|582
8OIQ|1|B8|A|583
8OIQ|1|B8|A|584
8OIQ|1|B8|A|585
8OIQ|1|B8|C|586
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- uL30m
- Chain BM
- ICT1
- Chain BP
- Mitochondrial ribosomal protein L10
- Chain BQ
- Mitochondrial ribosomal protein L11
- Chain BR
- 39S ribosomal protein L13, mitochondrial
- Chain BU
- uL16m
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain BZ
- Mitochondrial ribosomal protein L21
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Bb
- Mitochondrial ribosomal protein L53
- Chain Bc
- mL54
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bh
- Mitochondrial ribosomal protein S18A
- Chain Bl
- Ribosomal protein
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