J3_8OIQ_008
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GU*ACUUAUUGAUCC*GAUCAAC
- Length
- 21 nucleotides
- Bulged bases
- 8OIQ|1|B8|C|1226, 8OIQ|1|B8|A|1250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIQ|1|B8|G|1182
8OIQ|1|B8|U|1183
*
8OIQ|1|B8|A|1225
8OIQ|1|B8|C|1226
8OIQ|1|B8|U|1227
8OIQ|1|B8|U|1228
8OIQ|1|B8|A|1229
8OIQ|1|B8|U|1230
8OIQ|1|B8|U|1231
8OIQ|1|B8|G|1232
8OIQ|1|B8|A|1233
8OIQ|1|B8|U|1234
8OIQ|1|B8|C|1235
8OIQ|1|B8|C|1236
*
8OIQ|1|B8|G|1245
8OIQ|1|B8|A|1246
8OIQ|1|B8|U|1247
8OIQ|1|B8|C|1248
8OIQ|1|B8|A|1249
8OIQ|1|B8|A|1250
8OIQ|1|B8|C|1251
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain B7
- E-site tRNA
- Chain BD
- Mitochondrial ribosomal protein L27
- Chain BE
- Mitochondrial ribosomal protein L28
- Chain BI
- bL33m
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
Coloring options: