J3_8OIT_008
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AAAAUUUAACACCCAU*AUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 59 nucleotides
- Bulged bases
- 8OIT|1|B8|A|484, 8OIT|1|B8|U|489, 8OIT|1|B8|C|549, 8OIT|1|B8|C|551, 8OIT|1|B8|C|554, 8OIT|1|B8|U|563, 8OIT|1|B8|C|564, 8OIT|1|B8|A|571, 8OIT|1|B8|U|572, 8OIT|1|B8|A|573, 8OIT|1|B8|U|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIT|1|B8|A|483
8OIT|1|B8|A|484
8OIT|1|B8|A|485
8OIT|1|B8|A|486
8OIT|1|B8|U|487
8OIT|1|B8|U|488
8OIT|1|B8|U|489
8OIT|1|B8|A|490
8OIT|1|B8|A|491
8OIT|1|B8|C|492
8OIT|1|B8|A|493
8OIT|1|B8|C|494
8OIT|1|B8|C|495
8OIT|1|B8|C|496
8OIT|1|B8|A|497
8OIT|1|B8|U|498
*
8OIT|1|B8|A|522
8OIT|1|B8|U|523
8OIT|1|B8|U|524
8OIT|1|B8|A|525
8OIT|1|B8|A|526
8OIT|1|B8|G|527
*
8OIT|1|B8|C|542
8OIT|1|B8|A|543
8OIT|1|B8|A|544
8OIT|1|B8|C|545
8OIT|1|B8|A|546
8OIT|1|B8|C|547
8OIT|1|B8|C|548
8OIT|1|B8|C|549
8OIT|1|B8|A|550
8OIT|1|B8|C|551
8OIT|1|B8|U|552
8OIT|1|B8|A|553
8OIT|1|B8|C|554
8OIT|1|B8|C|555
8OIT|1|B8|U|556
8OIT|1|B8|A|557
8OIT|1|B8|A|558
8OIT|1|B8|A|559
8OIT|1|B8|A|560
8OIT|1|B8|A|561
8OIT|1|B8|A|562
8OIT|1|B8|U|563
8OIT|1|B8|C|564
8OIT|1|B8|C|565
8OIT|1|B8|C|566
8OIT|1|B8|A|567
8OIT|1|B8|A|568
8OIT|1|B8|A|569
8OIT|1|B8|C|570
8OIT|1|B8|A|571
8OIT|1|B8|U|572
8OIT|1|B8|A|573
8OIT|1|B8|U|574
8OIT|1|B8|A|575
8OIT|1|B8|A|576
8OIT|1|B8|C|577
8OIT|1|B8|U|578
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BM
- 39S ribosomal protein L3, mitochondrial
- Chain BP
- 39S ribosomal protein L10, mitochondrial
- Chain BQ
- 39S ribosomal protein L11, mitochondrial
- Chain BR
- 39S ribosomal protein L13, mitochondrial
- Chain BU
- 39S ribosomal protein L16, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Bb
- 39S ribosomal protein L53, mitochondrial
- Chain Bc
- 39S ribosomal protein L54, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bh
- 39S ribosomal protein S18a, mitochondrial
- Chain Bl
- 39S ribosomal protein L36, mitochondrial
Coloring options: