J3_8OJ8_011

3D structure

PDB id

8OJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

8OJ8|1|5|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ8|1|5|C|4970
8OJ8|1|5|A|4971
8OJ8|1|5|U|4972
*
8OJ8|1|5|G|4986
8OJ8|1|5|C|4987
8OJ8|1|5|U|4988
8OJ8|1|5|U|4989
8OJ8|1|5|C|4990
8OJ8|1|5|U|4991
*
8OJ8|1|5|A|5060
8OJ8|1|5|A|5061
8OJ8|1|5|G|5062
8OJ8|1|5|G|5063

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17