J3_8OJ8_024

3D structure

PDB id

8OJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUC*GUUG*CACUAAUA

Length

16 nucleotides

Bulged bases

8OJ8|1|5|A|4464, 8OJ8|1|5|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ8|1|5|U|4463
8OJ8|1|5|A|4464
8OJ8|1|5|U|4465
8OJ8|1|5|C|4466
*
8OJ8|1|5|G|4491
8OJ8|1|5|U|4492
8OJ8|1|5|U|4493
8OJ8|1|5|G|4494
*
8OJ8|1|5|C|4506
8OJ8|1|5|A|4507
8OJ8|1|5|C|4508
8OJ8|1|5|U|4509
8OJ8|1|5|A|4510
8OJ8|1|5|A|4511
8OJ8|1|5|U|4512
8OJ8|1|5|A|4513

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23