J3_8OO0_003

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAG*CGCAGC*GUCAAAU

Length

17 nucleotides

Bulged bases

8OO0|1|1|A|878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|A|810
8OO0|1|1|U|811
8OO0|1|1|A|812
8OO0|1|1|G|813
*
8OO0|1|1|C|845
8OO0|1|1|G|846
8OO0|1|1|C|847
8OO0|1|1|A|848
8OO0|1|1|G|849
8OO0|1|1|C|850
*
8OO0|1|1|G|873
8OO0|1|1|U|874
8OO0|1|1|C|875
8OO0|1|1|A|876
8OO0|1|1|A|877
8OO0|1|1|A|878
8OO0|1|1|U|879

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LR

Ribosomal protein L19

Chain Lg

Ribosomal protein l34-like protein

Chain Lj

Ribosomal protein L37