J3_8OO0_004

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|G|1213
8OO0|1|1|A|1214
8OO0|1|1|C|1215
8OO0|1|1|G|1216
*
8OO0|1|1|C|1238
8OO0|1|1|G|1239
8OO0|1|1|C|1240
8OO0|1|1|U|1241
8OO0|1|1|A|1242
8OO0|1|1|A|1243
8OO0|1|1|G|1244
8OO0|1|1|G|1245
*
8OO0|1|1|C|1260
8OO0|1|1|A|1261
8OO0|1|1|C|1262

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L12-like protein

Chain Ls

60S acidic ribosomal protein P0