J3_8OO0_023

3D structure

PDB id

8OO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAG*CGCCACAGAG*CGUAUA

Length

20 nucleotides

Bulged bases

8OO0|1|1|C|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OO0|1|1|U|180
8OO0|1|1|G|181
8OO0|1|1|A|182
8OO0|1|1|G|183
*
8OO0|1|1|C|199
8OO0|1|1|G|200
8OO0|1|1|C|201
8OO0|1|1|C|202
8OO0|1|1|A|203
8OO0|1|1|C|204
8OO0|1|1|A|205
8OO0|1|1|G|206
8OO0|1|1|A|207
8OO0|1|1|G|208
*
8OO0|1|1|C|220
8OO0|1|1|G|221
8OO0|1|1|U|222
8OO0|1|1|A|223
8OO0|1|1|U|224
8OO0|1|1|A|225

Current chains

Chain 1

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4-like protein

Chain LY

60S ribosomal protein L26-like protein