J3_8OO0_026
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGACUU*AGG*CGUAAUG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OO0|1|1|C|428
8OO0|1|1|A|429
8OO0|1|1|G|430
8OO0|1|1|A|431
8OO0|1|1|C|432
8OO0|1|1|U|433
8OO0|1|1|U|434
*
8OO0|1|1|A|484
8OO0|1|1|G|485
8OO0|1|1|G|486
*
8OO0|1|1|C|606
8OO0|1|1|G|607
8OO0|1|1|U|608
8OO0|1|1|A|609
8OO0|1|1|A|610
8OO0|1|1|U|611
8OO0|1|1|G|612
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain LP
- 60S ribosomal protein l17-like protein
- Chain Le
- 60S ribosomal protein L32-like protein
- Chain Lf
- 60S ribosomal protein l33-like protein
- Chain Lq
- Putative 60S ribosomal protein
Coloring options: