J3_8OO0_032
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUGCG*CAACU*GGGAAUA
- Length
- 18 nucleotides
- Bulged bases
- 8OO0|1|1|U|1609, 8OO0|1|1|U|1795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OO0|1|1|U|1607
8OO0|1|1|U|1608
8OO0|1|1|U|1609
8OO0|1|1|G|1610
8OO0|1|1|C|1611
8OO0|1|1|G|1612
*
8OO0|1|1|C|1621
8OO0|1|1|A|1622
8OO0|1|1|A|1623
8OO0|1|1|C|1624
8OO0|1|1|U|1625
*
8OO0|1|1|G|1790
8OO0|1|1|G|1791
8OO0|1|1|G|1792
8OO0|1|1|A|1793
8OO0|1|1|A|1794
8OO0|1|1|U|1795
8OO0|1|1|A|1796
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LZ
- 60S ribosomal protein L27
- Chain Lg
- Ribosomal protein l34-like protein
- Chain Lr
- 60S ribosomal protein L41-A
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