J3_8OO0_046
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AC*GAUAAGUAA*UCGAAUCU
- Length
- 19 nucleotides
- Bulged bases
- 8OO0|1|4|U|60, 8OO0|1|4|A|62, 8OO0|1|4|G|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OO0|1|4|A|44
8OO0|1|4|C|45
*
8OO0|1|4|G|58
8OO0|1|4|A|59
8OO0|1|4|U|60
8OO0|1|4|A|61
8OO0|1|4|A|62
8OO0|1|4|G|63
8OO0|1|4|U|64
8OO0|1|4|A|65
8OO0|1|4|A|66
*
8OO0|1|4|U|93
8OO0|1|4|C|94
8OO0|1|4|G|95
8OO0|1|4|A|96
8OO0|1|4|A|97
8OO0|1|4|U|98
8OO0|1|4|C|99
8OO0|1|4|U|100
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LX
- 60S ribosomal protein L25-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Lh
- dolichyl-diphosphooligosaccharide--protein glycotransferase
- Chain Lj
- Ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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