J3_8P09_015
3D structure
- PDB id
- 8P09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with non methylated mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGGA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 8P09|1|2|G|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P09|1|2|U|672
8P09|1|2|G|673
8P09|1|2|G|674
8P09|1|2|A|675
*
8P09|1|2|U|913
8P09|1|2|U|914
8P09|1|2|A|915
8P09|1|2|A|916
8P09|1|2|G|917
8P09|1|2|A|918
8P09|1|2|G|919
*
8P09|1|2|C|1015
8P09|1|2|A|1016
8P09|1|2|U|1017
8P09|1|2|U|1018
8P09|1|2|A|1019
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain J
- ribosomal protein eS7
- Chain N
- 40S ribosomal protein S11
- Chain P
- ribosomal protein uS15
- Chain Y
- Ribosomal protein S15a
- Chain Z
- 40S ribosomal protein S23
- Chain c
- 40S ribosomal protein S27
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