J3_8P17_035

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8P17|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8P17_035 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.0985

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8P17|1|2|C|990
8P17|1|2|U|991
8P17|1|2|U|992
8P17|1|2|G|993
8P17|1|2|A|994
8P17|1|2|C|995
8P17|1|2|A|996
8P17|1|2|U|997
*
8P17|1|2|A|1044
8P17|1|2|C|1045
8P17|1|2|A|1046
8P17|1|2|G|1047
*
8P17|1|2|C|1210
8P17|1|2|U|1211
8P17|1|2|U|1212
8P17|1|2|A|1213
8P17|1|2|C|1214
8P17|1|2|G|1215

Current chains

Chain 2

16S RNA

Nearby chains

Chain 6

Peptide chain release factor RF2

Chain s

Small ribosomal subunit protein uS14