J3_8P18_032

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CGG*CUUG*CG

Length

9 nucleotides

Bulged bases

8P18|1|2|U|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8P18_032 not in the Motif Atlas

Geometric match to J3_4LFB_011

Geometric discrepancy: 0.0852

The information below is about J3_4LFB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_56052.5

Basepair signature

cWW-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

8P18|1|2|C|586
8P18|1|2|G|587
8P18|1|2|G|588
*
8P18|1|2|C|651
8P18|1|2|U|652
8P18|1|2|U|653
8P18|1|2|G|654
*
8P18|1|2|C|754
8P18|1|2|G|755

Current chains

Chain 2

16S rRNA

Nearby chains

Chain m

Small ribosomal subunit protein uS8

Chain q

Small ribosomal subunit protein uS12

Chain t

Small ribosomal subunit protein uS15

Chain v

Small ribosomal subunit protein uS17