J3_8P2F_036
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- UAA*UGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 8P2F|1|a|U|1193
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P2F_036 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.1451
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8P2F|1|a|U|1127
8P2F|1|a|A|1128
8P2F|1|a|A|1129
*
8P2F|1|a|U|1165
8P2F|1|a|G|1166
8P2F|1|a|A|1167
8P2F|1|a|C|1168
8P2F|1|a|U|1169
8P2F|1|a|G|1170
8P2F|1|a|C|1171
*
8P2F|1|a|G|1185
8P2F|1|a|A|1186
8P2F|1|a|G|1187
8P2F|1|a|G|1188
8P2F|1|a|A|1189
8P2F|1|a|A|1190
8P2F|1|a|G|1191
8P2F|1|a|G|1192
8P2F|1|a|U|1193
8P2F|1|a|G|1194
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14 type Z
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