J3_8P2K_022

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCUG*CAAGG

Length

21 nucleotides

Bulged bases

8P2K|1|B5|U|4728

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|C|4709
8P2K|1|B5|A|4710
8P2K|1|B5|PSU|4711
8P2K|1|B5|U|4712
8P2K|1|B5|C|4713
8P2K|1|B5|G|4714
*
8P2K|1|B5|C|4722
8P2K|1|B5|C|4723
8P2K|1|B5|U|4724
8P2K|1|B5|G|4725
8P2K|1|B5|C|4726
8P2K|1|B5|U|4727
8P2K|1|B5|U|4728
8P2K|1|B5|C|4729
8P2K|1|B5|U|4730
8P2K|1|B5|G|4731
*
8P2K|1|B5|C|4798
8P2K|1|B5|A|4799
8P2K|1|B5|A|4800
8P2K|1|B5|G|4801
8P2K|1|B5|G|4802

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BP

uL22

Chain Bd

60S ribosomal protein L31