J3_8P8N_006

3D structure

PDB id

8P8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPL39 integrated into the yeast 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

CUG*CGGAAGGUAG*UGAAUG

Length

19 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P8N|1|A|C|2192
8P8N|1|A|U|2193
8P8N|1|A|G|2194
*
8P8N|1|A|C|2248
8P8N|1|A|G|2249
8P8N|1|A|G|2250
8P8N|1|A|A|2270
8P8N|1|A|A|2271
8P8N|1|A|G|2272
8P8N|1|A|G|2273
8P8N|1|A|U|2274
8P8N|1|A|A|2275
8P8N|1|A|G|2276
*
8P8N|1|A|U|2310
8P8N|1|A|G|2311
8P8N|1|A|A|2312
8P8N|1|A|A|2313
8P8N|1|A|U|2314
8P8N|1|A|G|2315

Current chains

Chain A

25S rRNA

Nearby chains

Chain LF

60S ribosomal protein L2-A