J3_8P8N_012

3D structure

PDB id

8P8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPL39 integrated into the yeast 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

CCAUAU*AGC*GUG

Length

12 nucleotides

Bulged bases

8P8N|1|LE|U|12

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P8N|1|LE|C|9
8P8N|1|LE|C|10
8P8N|1|LE|A|11
8P8N|1|LE|U|12
8P8N|1|LE|A|13
8P8N|1|LE|U|14
*
8P8N|1|LE|A|66
8P8N|1|LE|G|67
8P8N|1|LE|C|68
*
8P8N|1|LE|G|110
8P8N|1|LE|U|111
8P8N|1|LE|G|112

Current chains

Chain LE

5S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain LI

60S ribosomal protein L5

Chain LN

60S ribosomal protein L10

Chain QT

60S ribosomal protein L21-A