J3_8PEG_024

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

8PEG|1|7|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8PEG_024 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0774

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8PEG|1|7|G|297
8PEG|1|7|G|298
8PEG|1|7|A|299
8PEG|1|7|A|300
8PEG|1|7|G|301
*
8PEG|1|7|C|316
8PEG|1|7|G|317
8PEG|1|7|C|318
8PEG|1|7|G|319
8PEG|1|7|A|320
8PEG|1|7|U|321
8PEG|1|7|A|322
8PEG|1|7|C|323
8PEG|1|7|A|324
8PEG|1|7|G|325
*
8PEG|1|7|C|337
8PEG|1|7|G|338
8PEG|1|7|U|339
8PEG|1|7|A|340
8PEG|1|7|C|341

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain x

50S ribosomal protein L24