J3_8PK0_008
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GCA*UCAAUUGAUCC*GACCAAC
- Length
- 21 nucleotides
- Bulged bases
- 8PK0|1|A|U|2926, 8PK0|1|A|A|2945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PK0|1|A|G|2877
8PK0|1|A|C|2878
8PK0|1|A|A|2879
*
8PK0|1|A|U|2921
8PK0|1|A|C|2922
8PK0|1|A|A|2923
8PK0|1|A|A|2924
8PK0|1|A|U|2925
8PK0|1|A|U|2926
8PK0|1|A|G|2927
8PK0|1|A|A|2928
8PK0|1|A|U|2929
8PK0|1|A|C|2930
8PK0|1|A|C|2931
*
8PK0|1|A|G|2940
8PK0|1|A|A|2941
8PK0|1|A|C|2942
8PK0|1|A|C|2943
8PK0|1|A|A|2944
8PK0|1|A|A|2945
8PK0|1|A|C|2946
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain x
- 5-methylcytosine rRNA methyltransferase NSUN4
Coloring options: