J3_8PVL_002
3D structure
- PDB id
- 8PVL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- CAGACUU*AGG*CGUAAUG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PVL|1|C1|C|428
8PVL|1|C1|A|429
8PVL|1|C1|G|430
8PVL|1|C1|A|431
8PVL|1|C1|C|432
8PVL|1|C1|U|433
8PVL|1|C1|U|434
*
8PVL|1|C1|A|484
8PVL|1|C1|G|485
8PVL|1|C1|G|486
*
8PVL|1|C1|C|606
8PVL|1|C1|G|607
8PVL|1|C1|U|608
8PVL|1|C1|A|609
8PVL|1|C1|A|610
8PVL|1|C1|U|611
8PVL|1|C1|G|612
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain LP
- 60S ribosomal protein l17-like protein
- Chain Le
- 60S ribosomal protein L32-like protein
- Chain Lf
- 60S ribosomal protein l33-like protein
- Chain Lq
- Putative 60S ribosomal protein
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