J3_8Q4F_003
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCA
- Length
- 24 nucleotides
- Bulged bases
- 8Q4F|1|A|A|975, 8Q4F|1|A|G|976, 8Q4F|1|A|A|978
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Q4F|1|A|U|955
8Q4F|1|A|U|956
8Q4F|1|A|U|957
8Q4F|1|A|A|958
8Q4F|1|A|A|959
8Q4F|1|A|U|960
8Q4F|1|A|U|961
8Q4F|1|A|C|962
*
8Q4F|1|A|G|973
8Q4F|1|A|A|974
8Q4F|1|A|A|975
8Q4F|1|A|G|976
8Q4F|1|A|A|977
8Q4F|1|A|A|978
8Q4F|1|A|C|979
8Q4F|1|A|C|980
8Q4F|1|A|U|981
8Q4F|1|A|U|982
8Q4F|1|A|A|983
8Q4F|1|A|C|984
*
8Q4F|1|A|G|1221
8Q4F|1|A|G|1222
8Q4F|1|A|C|1223
8Q4F|1|A|A|1225
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- Small ribosomal subunit protein uS10
- Chain M
- Small ribosomal subunit protein uS13
- Chain N
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein uS19
Coloring options: