J3_8Q5I_036
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UUUUAGAUG*CAUAGCAGG*CGGAUAGCAAUGUCAACA
- Length
- 36 nucleotides
- Bulged bases
- 8Q5I|1|1|A|3142, 8Q5I|1|1|G|3143, 8Q5I|1|1|A|3180, 8Q5I|1|1|G|3181, 8Q5I|1|1|G|3184, 8Q5I|1|1|A|3233, 8Q5I|1|1|A|3235, 8Q5I|1|1|C|3237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Q5I|1|1|U|3138
8Q5I|1|1|U|3139
8Q5I|1|1|U|3140
8Q5I|1|1|U|3141
8Q5I|1|1|A|3142
8Q5I|1|1|G|3143
8Q5I|1|1|A|3144
8Q5I|1|1|U|3145
8Q5I|1|1|G|3146
*
8Q5I|1|1|C|3177
8Q5I|1|1|A|3178
8Q5I|1|1|U|3179
8Q5I|1|1|A|3180
8Q5I|1|1|G|3181
8Q5I|1|1|C|3182
8Q5I|1|1|A|3183
8Q5I|1|1|G|3184
8Q5I|1|1|G|3185
*
8Q5I|1|1|C|3230
8Q5I|1|1|G|3231
8Q5I|1|1|G|3232
8Q5I|1|1|A|3233
8Q5I|1|1|U|3234
8Q5I|1|1|A|3235
8Q5I|1|1|G|3236
8Q5I|1|1|C|3237
8Q5I|1|1|A|3238
8Q5I|1|1|A|3239
8Q5I|1|1|U|3240
8Q5I|1|1|G|3241
8Q5I|1|1|U|3242
8Q5I|1|1|C|3243
8Q5I|1|1|A|3244
8Q5I|1|1|A|3245
8Q5I|1|1|C|3246
8Q5I|1|1|A|3247
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AG
- 60S ribosomal protein L33-A
- Chain n
- 60S ribosomal protein L6
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
- Chain x
- Ribosomal protein L22
Coloring options: