J3_8QK7_027

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8QK7_027 not in the Motif Atlas

Homologous match to J3_5J7L_005

Geometric discrepancy: 0.0789

The information below is about J3_5J7L_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_52655.4

Basepair signature

cWW-tSH-cWW-F-cWW-cWW

Number of instances in this motif group

4

Unit IDs

8QK7|1|2|U|943
8QK7|1|2|G|944
8QK7|1|2|G|945
8QK7|1|2|A|946
*
8QK7|1|2|U|1235
8QK7|1|2|A|1236
8QK7|1|2|C|1237
*
8QK7|1|2|G|1337
8QK7|1|2|G|1338
8QK7|1|2|A|1339
8QK7|1|2|A|1340

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain n

Small ribosomal subunit protein uS9

Chain r

Small ribosomal subunit protein uS13