J3_8QPP_011
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_011 not in the Motif Atlas
- Homologous match to J3_7RQB_005
- Geometric discrepancy: 0.0905
- The information below is about J3_7RQB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.4
- Basepair signature
- cWW-tSH-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
8QPP|1|X|C|745
8QPP|1|X|A|746
8QPP|1|X|G|747
*
8QPP|1|X|C|779
8QPP|1|X|G|780
8QPP|1|X|A|781
8QPP|1|X|A|782
8QPP|1|X|C|783
*
8QPP|1|X|G|807
8QPP|1|X|A|808
8QPP|1|X|U|809
8QPP|1|X|G|810
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: