J3_8RCL_008

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

8RCL|1|72|A|2518, 8RCL|1|72|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCL_008 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.1065

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

8RCL|1|72|C|2517
8RCL|1|72|A|2518
8RCL|1|72|U|2519
8RCL|1|72|C|2520
*
8RCL|1|72|G|2545
8RCL|1|72|U|2546
8RCL|1|72|A|2547
*
8RCL|1|72|U|2561
8RCL|1|72|U|2562
8RCL|1|72|U|2563
8RCL|1|72|A|2564
8RCL|1|72|A|2565
8RCL|1|72|A|2566
8RCL|1|72|G|2567

Current chains

Chain 72

23S ribosomal RNA

Nearby chains