J3_8RCM_025

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

8RCM|1|A2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCM_025 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.1509

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

8RCM|1|A2|C|990
8RCM|1|A2|U|991
8RCM|1|A2|U|992
8RCM|1|A2|G|993
*
8RCM|1|A2|C|1045
8RCM|1|A2|A|1046
8RCM|1|A2|G|1047
*
8RCM|1|A2|C|1210
8RCM|1|A2|U|1211
8RCM|1|A2|U|1212
8RCM|1|A2|A|1213
8RCM|1|A2|C|1214
8RCM|1|A2|G|1215

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain N2

Small ribosomal subunit protein uS14