J3_8RCM_034

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

8RCM|1|72|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCM_034 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0729

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8RCM|1|72|G|297
8RCM|1|72|G|298
8RCM|1|72|A|299
8RCM|1|72|A|300
8RCM|1|72|G|301
*
8RCM|1|72|C|316
8RCM|1|72|G|317
8RCM|1|72|C|318
8RCM|1|72|G|319
8RCM|1|72|A|320
8RCM|1|72|U|321
8RCM|1|72|A|322
8RCM|1|72|C|323
8RCM|1|72|A|324
8RCM|1|72|G|325
*
8RCM|1|72|C|337
8RCM|1|72|G|338
8RCM|1|72|U|339
8RCM|1|72|A|340
8RCM|1|72|C|341

Current chains

Chain 72

23S ribosomal RNA

Nearby chains