J3_8RCS_053

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8RCS|1|A2|U|1212, 8RCS|1|A2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCS_053 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1481

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8RCS|1|A2|C|990
8RCS|1|A2|U|991
8RCS|1|A2|U|992
8RCS|1|A2|G|993
8RCS|1|A2|A|994
8RCS|1|A2|C|995
8RCS|1|A2|A|996
8RCS|1|A2|U|997
*
8RCS|1|A2|A|1044
8RCS|1|A2|C|1045
8RCS|1|A2|A|1046
8RCS|1|A2|G|1047
*
8RCS|1|A2|C|1210
8RCS|1|A2|U|1211
8RCS|1|A2|U|1212
8RCS|1|A2|A|1213
8RCS|1|A2|C|1214
8RCS|1|A2|G|1215

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain N2

Small ribosomal subunit protein uS14