J3_8RCT_001

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8RCT|1|72|U|686, 8RCT|1|72|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCT_001 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.105

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8RCT|1|72|U|683
8RCT|1|72|G|684
8RCT|1|72|A|685
8RCT|1|72|U|686
8RCT|1|72|C|687
8RCT|1|72|U|688
8RCT|1|72|A|689
*
8RCT|1|72|U|773
8RCT|1|72|G|774
8RCT|1|72|G|775
*
8RCT|1|72|C|791
8RCT|1|72|A|792
8RCT|1|72|A|793
8RCT|1|72|A|794

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34