J3_8RCT_025

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

8RCT|1|A2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCT_025 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.1508

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

8RCT|1|A2|C|990
8RCT|1|A2|U|991
8RCT|1|A2|U|992
8RCT|1|A2|G|993
*
8RCT|1|A2|C|1045
8RCT|1|A2|A|1046
8RCT|1|A2|G|1047
*
8RCT|1|A2|C|1210
8RCT|1|A2|U|1211
8RCT|1|A2|U|1212
8RCT|1|A2|A|1213
8RCT|1|A2|C|1214
8RCT|1|A2|G|1215

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain N2

Small ribosomal subunit protein uS14