J3_8RDW_034

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

AGAAUC*GAGUGC*GAAUU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDW|1|iN|A|1046
8RDW|1|iN|G|1047
8RDW|1|iN|A|1048
8RDW|1|iN|A|1049
8RDW|1|iN|U|1050
8RDW|1|iN|C|1051
*
8RDW|1|iN|G|1066
8RDW|1|iN|A|1067
8RDW|1|iN|G|1068
8RDW|1|iN|U|1069
8RDW|1|iN|G|1070
8RDW|1|iN|C|1071
*
8RDW|1|iN|G|1078
8RDW|1|iN|A|1079
8RDW|1|iN|A|1080
8RDW|1|iN|U|1081
8RDW|1|iN|U|1082

Current chains

Chain iN

16S rRNA

Nearby chains

Chain CT

Small ribosomal subunit protein uS3

Chain HK

Small ribosomal subunit protein uS14