J3_8RRI_005
3D structure
- PDB id
- 8RRI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with antibiotic tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AAAAUUUAACACCCAUAG*CAAUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 63 nucleotides
- Bulged bases
- 8RRI|1|A|A|2154, 8RRI|1|A|U|2159, 8RRI|1|A|U|2233, 8RRI|1|A|C|2234, 8RRI|1|A|A|2241, 8RRI|1|A|U|2242, 8RRI|1|A|A|2243, 8RRI|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RRI|1|A|A|2153
8RRI|1|A|A|2154
8RRI|1|A|A|2155
8RRI|1|A|A|2156
8RRI|1|A|U|2157
8RRI|1|A|U|2158
8RRI|1|A|U|2159
8RRI|1|A|A|2160
8RRI|1|A|A|2161
8RRI|1|A|C|2162
8RRI|1|A|A|2163
8RRI|1|A|C|2164
8RRI|1|A|C|2165
8RRI|1|A|C|2166
8RRI|1|A|A|2167
8RRI|1|A|U|2168
8RRI|1|A|A|2169
8RRI|1|A|G|2170
*
8RRI|1|A|C|2190
8RRI|1|A|A|2191
8RRI|1|A|A|2192
8RRI|1|A|U|2193
8RRI|1|A|U|2194
8RRI|1|A|A|2195
8RRI|1|A|A|2196
8RRI|1|A|G|2197
*
8RRI|1|A|C|2212
8RRI|1|A|A|2213
8RRI|1|A|A|2214
8RRI|1|A|C|2215
8RRI|1|A|A|2216
8RRI|1|A|C|2217
8RRI|1|A|C|2218
8RRI|1|A|C|2219
8RRI|1|A|A|2220
8RRI|1|A|C|2221
8RRI|1|A|U|2222
8RRI|1|A|A|2223
8RRI|1|A|C|2224
8RRI|1|A|C|2225
8RRI|1|A|U|2226
8RRI|1|A|A|2227
8RRI|1|A|A|2228
8RRI|1|A|A|2229
8RRI|1|A|A|2230
8RRI|1|A|A|2231
8RRI|1|A|A|2232
8RRI|1|A|U|2233
8RRI|1|A|C|2234
8RRI|1|A|C|2235
8RRI|1|A|C|2236
8RRI|1|A|A|2237
8RRI|1|A|A|2238
8RRI|1|A|A|2239
8RRI|1|A|C|2240
8RRI|1|A|A|2241
8RRI|1|A|U|2242
8RRI|1|A|A|2243
8RRI|1|A|U|2244
8RRI|1|A|A|2245
8RRI|1|A|A|2246
8RRI|1|A|C|2247
8RRI|1|A|U|2248
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain K
- Large ribosomal subunit protein uL13m
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain k
- Large ribosomal subunit protein mL53
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: