J3_8RRI_010

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUCUUA*UAACCCCAG*CAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|AA|C|677
8RRI|1|AA|U|678
8RRI|1|AA|C|679
8RRI|1|AA|U|680
8RRI|1|AA|U|681
8RRI|1|AA|A|682
*
8RRI|1|AA|U|864
8RRI|1|AA|A|865
8RRI|1|AA|A|866
8RRI|1|AA|C|867
8RRI|1|AA|C|868
8RRI|1|AA|C|869
8RRI|1|AA|C|870
8RRI|1|AA|A|871
8RRI|1|AA|G|872
*
8RRI|1|AA|C|917
8RRI|1|AA|A|918
8RRI|1|AA|A|919
8RRI|1|AA|G|920

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial

Chain AT

Small ribosomal subunit protein mS25