J3_8RRI_013

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|AA|C|1192
8RRI|1|AA|U|1193
8RRI|1|AA|C|1194
*
8RRI|1|AA|G|1428
8RRI|1|AA|C|1429
8RRI|1|AA|A|1430
8RRI|1|AA|G|1431
8RRI|1|AA|U|1432
8RRI|1|AA|A|1433
8RRI|1|AA|A|1434
*
8RRI|1|AA|U|1456
8RRI|1|AA|G|1457
8RRI|1|AA|A|1458
8RRI|1|AA|A|1459
8RRI|1|AA|C|1460
8RRI|1|AA|A|1461
8RRI|1|AA|G|1462

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Small ribosomal subunit protein mS37

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial