J3_8RRI_015

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

8RRI|1|AA|U|1229, 8RRI|1|AA|C|1230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|AA|U|1210
8RRI|1|AA|G|1211
8RRI|1|AA|U|1212
8RRI|1|AA|A|1213
8RRI|1|AA|A|1214
8RRI|1|AA|U|1215
8RRI|1|AA|C|1216
*
8RRI|1|AA|G|1227
8RRI|1|AA|A|1228
8RRI|1|AA|U|1229
8RRI|1|AA|C|1230
8RRI|1|AA|A|1231
8RRI|1|AA|A|1232
8RRI|1|AA|C|1233
8RRI|1|AA|C|1234
8RRI|1|AA|U|1235
8RRI|1|AA|C|1236
8RRI|1|AA|A|1237
8RRI|1|AA|C|1238
*
8RRI|1|AA|G|1351
8RRI|1|AA|C|1352
8RRI|1|AA|A|1353
8RRI|1|AA|A|1354

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial