J3_8SCB_016

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUU(PSU)G

Length

20 nucleotides

Bulged bases

8SCB|1|9|G|991

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|9|C|937
8SCB|1|9|A|938
8SCB|1|9|U|939
8SCB|1|9|U|940
8SCB|1|9|C|941
*
8SCB|1|9|G|985
8SCB|1|9|G|986
8SCB|1|9|A|987
8SCB|1|9|C|988
8SCB|1|9|C|989
8SCB|1|9|A|990
8SCB|1|9|G|991
8SCB|1|9|A|992
8SCB|1|9|G|993
*
8SCB|1|9|C|1000
8SCB|1|9|A|1001
8SCB|1|9|U|1002
8SCB|1|9|U|1003
8SCB|1|9|PSU|1004
8SCB|1|9|G|1005

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain BB

eS1

Chain NN

uS15

Chain OO

uS11

Chain aa

40S ribosomal protein S26

Chain p

eL43