J3_8SCB_029

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

8SCB|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SCB|1|5|C|451
8SCB|1|5|A|452
8SCB|1|5|G|453
8SCB|1|5|U|454
8SCB|1|5|C|455
*
8SCB|1|5|G|701
8SCB|1|5|U|702
8SCB|1|5|G|703
8SCB|1|5|C|704
8SCB|1|5|G|705
*
8SCB|1|5|C|1292
8SCB|1|5|G|1293
8SCB|1|5|A|1294
8SCB|1|5|U|1295
8SCB|1|5|G|1296

Current chains

Chain 5

28S_rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

eL32

Chain f

eL33

Chain r

eL28