J3_8T30_011
3D structure
- PDB id
- 8T30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- GAC*GCUAAGGAGUG*CUCAC
- Length
- 19 nucleotides
- Bulged bases
- 8T30|1|A1|U|1258, 8T30|1|A1|A|1259, 8T30|1|A1|A|1260, 8T30|1|A1|A|1263, 8T30|1|A1|C|1277, 8T30|1|A1|A|1278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T30|1|A1|G|1230
8T30|1|A1|A|1231
8T30|1|A1|C|1232
*
8T30|1|A1|G|1256
8T30|1|A1|C|1257
8T30|1|A1|U|1258
8T30|1|A1|A|1259
8T30|1|A1|A|1260
8T30|1|A1|G|1261
8T30|1|A1|G|1262
8T30|1|A1|A|1263
8T30|1|A1|G|1264
8T30|1|A1|U|1265
8T30|1|A1|G|1266
*
8T30|1|A1|C|1275
8T30|1|A1|U|1276
8T30|1|A1|C|1277
8T30|1|A1|A|1278
8T30|1|A1|C|1279
Current chains
- Chain A1
- 25S rRNA
Nearby chains
No other chains within 10ÅColoring options: