J3_8T5D_023

3D structure

PDB id

8T5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCGACCC*GGAAA*UA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T5D|1|B|U|1344
8T5D|1|B|C|1345
8T5D|1|B|G|1346
8T5D|1|B|A|1347
8T5D|1|B|C|1348
8T5D|1|B|C|1349
8T5D|1|B|C|1350
*
8T5D|1|B|G|1381
8T5D|1|B|G|1382
8T5D|1|B|A|1383
8T5D|1|B|A|1384
8T5D|1|B|A|1385
*
8T5D|1|B|U|1402
8T5D|1|B|A|1403

Current chains

Chain B

23S RNA

Nearby chains

Chain T

50S ribosomal protein L23