J3_8T8C_031

3D structure

PDB id

8T8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAAC*GGUGCCC*GGGAGCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T8C|1|2a|G|1002
8T8C|1|2a|G|1003
8T8C|1|2a|A|1004
8T8C|1|2a|A|1005
8T8C|1|2a|C|1006
*
8T8C|1|2a|G|1023
8T8C|1|2a|G|1024
8T8C|1|2a|U|1025
8T8C|1|2a|G|1026
8T8C|1|2a|C|1027
8T8C|1|2a|C|1028
8T8C|1|2a|C|1029
*
8T8C|1|2a|G|1032
8T8C|1|2a|G|1033
8T8C|1|2a|G|1034
8T8C|1|2a|A|1035
8T8C|1|2a|G|1036
8T8C|1|2a|C|1037
8T8C|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains