J3_8T8C_041

3D structure

PDB id

8T8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CAGGAG*CUUUAAAG*CACUG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T8C|1|1A|C|1053
8T8C|1|1A|A|1054
8T8C|1|1A|G|1055
8T8C|1|1A|G|1056
8T8C|1|1A|A|1057
8T8C|1|1A|G|1058
*
8T8C|1|1A|C|1080
8T8C|1|1A|U|1081
8T8C|1|1A|U|1082
8T8C|1|1A|U|1083
8T8C|1|1A|A|1084
8T8C|1|1A|A|1085
8T8C|1|1A|A|1086
8T8C|1|1A|G|1087
*
8T8C|1|1A|C|1102
8T8C|1|1A|A|1103
8T8C|1|1A|C|1104
8T8C|1|1A|U|1105
8T8C|1|1A|G|1106

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L36