J3_8UIZ_016

3D structure

PDB id

8UIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8UIZ|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UIZ|1|L5|A|2551
8UIZ|1|L5|G|2552
8UIZ|1|L5|A|2553
8UIZ|1|L5|U|2554
8UIZ|1|L5|G|2555
*
8UIZ|1|L5|C|2572
8UIZ|1|L5|A|2573
8UIZ|1|L5|G|2574
8UIZ|1|L5|U|2575
*
8UIZ|1|L5|A|2757
8UIZ|1|L5|G|2758
8UIZ|1|L5|G|2759
8UIZ|1|L5|G|2760
8UIZ|1|L5|U|2761
8UIZ|1|L5|G|2762
8UIZ|1|L5|U|2763
8UIZ|1|L5|A|2764
8UIZ|1|L5|A|2765
8UIZ|1|L5|A|2766
8UIZ|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27