J3_8UJ9_015

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8UJ9|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|A|2551
8UJ9|1|L5|G|2552
8UJ9|1|L5|A|2553
8UJ9|1|L5|U|2554
8UJ9|1|L5|G|2555
*
8UJ9|1|L5|C|2572
8UJ9|1|L5|A|2573
8UJ9|1|L5|G|2574
8UJ9|1|L5|U|2575
*
8UJ9|1|L5|A|2757
8UJ9|1|L5|G|2758
8UJ9|1|L5|G|2759
8UJ9|1|L5|G|2760
8UJ9|1|L5|U|2761
8UJ9|1|L5|G|2762
8UJ9|1|L5|U|2763
8UJ9|1|L5|A|2764
8UJ9|1|L5|A|2765
8UJ9|1|L5|A|2766
8UJ9|1|L5|U|2767

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LZ

60S ribosomal protein L27